SMTL ID : 3phq.1

Crystal structure of S64-4 in complex with KDO

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-mer

Ligands

1 x KDO: 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid(Non-covalent)

KDO.1: 7 residues within 4Å: Chain A: R.96, E.97, R.99 Chain B: Y.33, F.50, R.52, I.102 10 PLIP interactions: 6 interactions with chain B, 4 interactions with chain A Hydrophobic interactions: B:Y.33, B:I.102 Hydrogen bonds: B:Y.33, B:Y.33, A:R.96, A:E.97, A:R.99, A:R.99 Water bridges: B:Y.33 Salt bridges: B:R.52

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Evans, D.W. et al., Structural insights into parallel strategies for germline antibody recognition of lipopolysaccharide from Chlamydia. Glycobiology (2011)

Release Date

2011-05-18

Peptides

S64-4 Fab (IgG1) light chain: A
S64-4 Fab (IgG1) heavy chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

S64-4 Fab (IgG1) light chain

S64-4 Fab (IgG1) heavy chain

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