SMTL ID : 3pm8.1

CAD domain of PFF0520w, Calcium dependent protein kinase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

6 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: D.139, D.141, N.143, K.145, E.150 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.139, A:D.141, A:K.145, A:E.150, H2O.1 CA.2: 5 residues within 4Å: Chain A: D.177, N.179, D.181, E.183, E.188 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.177, A:D.181, A:E.183, A:E.188, H2O.1 CA.3: 6 residues within 4Å: Chain A: D.67, D.69, S.71, T.73, E.78, Q.109 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.67, A:D.69, A:T.73, A:E.78, A:E.78 CA.6: 5 residues within 4Å: Chain B: D.67, D.69, S.71, T.73, E.78 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.67, B:D.69, B:E.78, B:E.78, H2O.5 CA.7: 5 residues within 4Å: Chain B: D.139, D.141, N.143, K.145, E.150 5 PLIP interactions: 5 interactions with chain B Metal complexes: B:D.139, B:D.141, B:K.145, B:E.150, B:E.150 CA.8: 5 residues within 4Å: Chain B: D.177, N.179, D.181, E.183, E.188 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.177, B:D.181, B:E.183, B:E.188, H2O.3

3 x NA: SODIUM ION(Non-functional Binders)

NA.4: 3 residues within 4Å: Chain A: D.185, F.186, H.187 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.185, A:F.186, A:H.187 NA.9: 3 residues within 4Å: Chain B: N.37, E.38, L.172 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:E.38 NA.10: 3 residues within 4Å: Chain B: C.52, D.53, V.54 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:D.53, B:V.54

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.5: 2 residues within 4Å: Chain A: N.37, E.38 Ligand excluded by PLIP CL.11: 4 residues within 4Å: Chain A: K.128, F.186 Chain B: D.69, N.70 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wernimont, A.K. et al., CAD domain of PFF0520w, Calcium dependent protein kinase. TO BE PUBLISHED

Release Date

2010-12-08

Peptides

Calcium-dependent protein kinase 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Calcium-dependent protein kinase 2