SMTL ID : 3pmm.1

The crystal structure of a possible member of GH105 family from Klebsiella pneumoniae subsp. pneumoniae MGH 78578

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x IMD: IMIDAZOLE(Non-covalent)

IMD.1: 8 residues within 4Å: Chain A: L.38, T.60, K.61, G.62, W.63, T.69, H.70, P.364 1 PLIP interactions: 1 interactions with chain A pi-Stacking: A:H.70

8 x FMT: FORMIC ACID(Non-functional Binders)

FMT.2: 2 residues within 4Å: Chain A: R.259, T.263 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.259, A:T.263 FMT.3: 4 residues within 4Å: Chain A: Q.79, Q.82, Y.121, E.247 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.82 Water bridges: A:Q.79, A:K.307 FMT.4: 4 residues within 4Å: Chain A: M.143, Q.190, E.193, E.194 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.194, A:E.194 FMT.5: 2 residues within 4Å: Chain A: A.160, E.161 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.161 FMT.6: 3 residues within 4Å: Chain A: F.123, G.127, M.129 No protein-ligand interaction detected (PLIP) FMT.7: 4 residues within 4Å: Chain A: E.103, G.104, A.105, T.106 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.106, A:T.106 Water bridges: A:E.103, A:E.103 FMT.8: 2 residues within 4Å: Chain A: R.32, E.88 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.88 FMT.9: 7 residues within 4Å: Chain A: G.71, V.72, Y.75, A.114, L.117, M.173, P.178 No protein-ligand interaction detected (PLIP)

Links

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Citation

Tan, K. et al., The crystal structure of a possible member of GH105 family from Klebsiella pneumoniae subsp. pneumoniae MGH 78578. To be Published

Release Date

2010-12-29

Peptides

Putative cytoplasmic protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Putative cytoplasmic protein