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SMTL ID : 3pnp.1
THE HIGH RESOLUTION CRYSTAL STRUCTURE OF BOVINE SPLEEN PURINE NUCLEOSIDE PHOSPHORYLASE IN COMPLEX FORMS WITH PHOSPHATE AND 9-DEAZAINOSINE
Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.60 Å
Oligo State
homo-trimer
Ligands
3 x
MG
:
MAGNESIUM ION
(Non-covalent)
MG.1:
1 residues within 4Å:
Chain A:
E.22
No protein-ligand interaction detected (PLIP)
MG.3:
1 residues within 4Å:
Chain B:
E.22
No protein-ligand interaction detected (PLIP)
MG.5:
1 residues within 4Å:
Chain C:
E.22
No protein-ligand interaction detected (PLIP)
3 x
PO4
:
PHOSPHATE ION
(Non-functional Binders)
PO4.2:
8 residues within 4Å:
Chain A:
G.32
,
S.33
,
H.64
,
R.84
,
H.86
,
N.115
,
A.116
,
S.220
15
PLIP interactions
:
15 interactions with chain A
Hydrogen bonds:
A:S.33
,
A:S.33
,
A:S.33
,
A:A.116
,
A:S.220
Water bridges:
A:S.33
,
A:S.33
,
A:S.33
,
A:S.33
,
A:H.86
,
A:M.219
,
A:M.219
Salt bridges:
A:H.64
,
A:R.84
,
A:H.86
PO4.4:
8 residues within 4Å:
Chain B:
G.32
,
S.33
,
H.64
,
R.84
,
H.86
,
N.115
,
A.116
,
S.220
15
PLIP interactions
:
15 interactions with chain B
Hydrogen bonds:
B:S.33
,
B:S.33
,
B:S.33
,
B:A.116
,
B:S.220
Water bridges:
B:S.33
,
B:S.33
,
B:S.33
,
B:S.33
,
B:H.86
,
B:M.219
,
B:M.219
Salt bridges:
B:H.64
,
B:R.84
,
B:H.86
PO4.6:
8 residues within 4Å:
Chain C:
G.32
,
S.33
,
H.64
,
R.84
,
H.86
,
N.115
,
A.116
,
S.220
15
PLIP interactions
:
15 interactions with chain C
Hydrogen bonds:
C:S.33
,
C:S.33
,
C:S.33
,
C:A.116
,
C:S.220
Water bridges:
C:S.33
,
C:S.33
,
C:S.33
,
C:S.33
,
C:H.86
,
C:M.219
,
C:M.219
Salt bridges:
C:H.64
,
C:R.84
,
C:H.86
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Pugmire, M.J. et al., The High Resolution Crystal Structure of Bovine Spleen Purine Nucleoside Phosphorylase in Complex Forms with Phosphate and 9-Deazainosine. To be Published
Release Date
1999-03-30
Peptides
PURINE NUCLEOSIDE PHOSPHORYLASE:
A
B
C
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
A
C
A
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PURINE NUCLEOSIDE PHOSPHORYLASE
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1pbn.1
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4pnp.1
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