SMTL ID : 3po9.2 (1 other biounit)

Crystal structure of PPARgamma ligand binding domain in complex with tripropyltin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

monomer

Ligands

1 x XPT: 1-[chloro(dipropyl)-lambda~4~-sulfanyl]propane(Non-covalent)

XPT.1: 10 residues within 4Å: Chain A: F.91, C.94, Y.136, I.150, L.162, F.169, M.173, H.258 Ligands: PGO.2, PGO.5 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:I.150, A:L.162

4 x PGO: S-1,2-PROPANEDIOL(Non-covalent)

PGO.2: 7 residues within 4Å: Chain A: I.90, G.93, C.94, I.150, S.151 Ligands: XPT.1, PGO.5 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:I.150 Hydrogen bonds: A:I.90, A:S.151 PGO.3: 5 residues within 4Å: Chain A: Y.129, D.205, R.206, P.207, R.252 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.129, A:D.205, A:R.206 PGO.4: 3 residues within 4Å: Chain A: K.128, Y.129, H.132 No protein-ligand interaction detected (PLIP) PGO.5: 5 residues within 4Å: Chain A: C.94, R.97, S.98 Ligands: XPT.1, PGO.2 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:R.97

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

le Maire, A. et al., Crystal structure of PPARgamma ligand binding domain in complex with tripropyltin. To be Published

Release Date

2011-11-23

Peptides

Peroxisome proliferator-activated receptor gamma: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Peroxisome proliferator-activated receptor gamma

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