SMTL ID : 3ps7.1

Biochemical studies and crystal structure determination of dihydrodipicolinate synthase from Pseudomonas aeruginosa

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.85 Å

Oligo State

homo-dimer

Ligands

7 x PGO: S-1,2-PROPANEDIOL(Non-covalent)

PGO.1: 1 residues within 4Å: Chain A: L.268 1 PLIP interactions: 1 interactions with chain B Water bridges: B:H.121 PGO.2: 3 residues within 4Å: Chain A: Q.112, T.147, R.150 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:Q.112 Hydrogen bonds: A:R.150 PGO.3: 2 residues within 4Å: Chain A: G.69, D.98 1 PLIP interactions: 1 interactions with chain A Water bridges: A:G.69 PGO.4: 1 residues within 4Å: Chain B: F.30 1 PLIP interactions: 1 interactions with chain B Water bridges: B:Q.33 PGO.5: 3 residues within 4Å: Chain B: M.1, D.98, P.129 No protein-ligand interaction detected (PLIP) PGO.6: 7 residues within 4Å: Chain A: S.247 Chain B: K.109, P.110, Q.112, M.115, C.141, D.142 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:K.109 Hydrogen bonds: B:Q.112, B:D.142 PGO.7: 2 residues within 4Å: Chain B: L.196, L.197 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kaur, N. et al., Biochemical studies and crystal structure determination of dihydrodipicolinate synthase from Pseudomonas aeruginosa. Int.J.Biol.Macromol. (2011)

Release Date

2010-12-15

Peptides

Dihydrodipicolinate synthase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Dihydrodipicolinate synthase

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