SMTL ID : 3pv6.1

Crystal structure of NKp30 bound to its ligand B7-H6

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

hetero-1-1-mer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 6 residues within 4Å: Chain A: R.123, E.141, S.143, I.177, N.179, N.185 No protein-ligand interaction detected (PLIP)

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 2 residues within 4Å: Chain A: N.18, N.20 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.20 NAG.3: 2 residues within 4Å: Chain A: N.34, T.36 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.34, A:T.36

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, Y. et al., Structure of the activating natural killer cell receptor NKp30 bound to its ligand B7-H6 reveals basis for tumor cell recognition in humans. to be published

Release Date

2011-03-16

Peptides

Ig-like domain-containing protein DKFZp686O24166/DKFZp686I21167: A
Natural cytotoxicity triggering receptor 3: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Ig-like domain-containing protein DKFZp686O24166/DKFZp686I21167

Natural cytotoxicity triggering receptor 3

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