SMTL ID : 3pv7.1

Crystal structure of NKp30 ligand B7-H6

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 7 residues within 4Å: Chain A: R.123, E.141, S.143, I.177, K.178, N.179, N.185 No protein-ligand interaction detected (PLIP)

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 1 residues within 4Å: Chain A: N.20 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.20, A:N.20 NAG.3: 3 residues within 4Å: Chain A: N.34, T.36, S.37 No protein-ligand interaction detected (PLIP) NAG.4: 3 residues within 4Å: Chain A: Q.204, R.217, N.219 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.217, A:N.219

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, Y. et al., Structure of the activating natural killer cell receptor NKp30 bound to its ligand B7-H6 reveals basis for tumor cell recognition in humans. to be published

Release Date

2011-03-16

Peptides

Ig-like domain-containing protein DKFZp686O24166/DKFZp686I21167: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ig-like domain-containing protein DKFZp686O24166/DKFZp686I21167

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