SMTL ID : 3pvl.1

Structure of myosin VIIa MyTH4-FERM-SH3 in complex with the CEN1 of Sans

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

hetero-1-1-mer

Ligands

9 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: E.481, K.492, D.494, V.495, I.496, D.508, E.509 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.481, A:E.481, A:K.492 GOL.2: 3 residues within 4Å: Chain A: P.473, Y.505, E.516 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.505, A:E.516 Water bridges: A:F.470, A:T.502 GOL.3: 5 residues within 4Å: Chain A: E.389, E.391, E.427, K.432, W.437 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.432, A:K.432 GOL.4: 4 residues within 4Å: Chain A: P.488, K.544, D.546, Y.548 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.544, A:K.544, A:Y.548 GOL.5: 6 residues within 4Å: Chain A: Y.64, H.65, D.66, D.67, D.70, A.172 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.64, A:D.66, A:D.66, A:D.67 GOL.6: 1 residues within 4Å: Chain A: Y.335 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Y.335 GOL.7: 5 residues within 4Å: Chain A: F.403, V.404, D.405, Y.406, G.407 No protein-ligand interaction detected (PLIP) GOL.8: 2 residues within 4Å: Chain A: V.513, L.514 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.514 Water bridges: A:E.516, A:E.516 GOL.10: 5 residues within 4Å: Chain A: F.351, R.379 Chain B: G.17 Ligands: PO4.9, PO4.11 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:R.379, A:R.379, B:G.17

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.9: 4 residues within 4Å: Chain A: T.269, R.349, R.379 Ligands: GOL.10 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.349, A:R.379 PO4.11: 6 residues within 4Å: Chain B: R.15, P.16, G.17, L.18, G.19 Ligands: GOL.10 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:G.17, B:L.18, B:L.18

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wu, L. et al., Structure of MyTH4-FERM domains in myosin VIIa tail bound to cargo. Science (2011)

Release Date

2011-03-02

Peptides

Myosin VIIa isoform 1: A
Usher syndrome type-1G protein: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Myosin VIIa isoform 1

Usher syndrome type-1G protein