SMTL ID : 3pvo.2 (3 other biounits)

Monoclinic form of Human C-Reactive Protein

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

homo-pentamer

Ligands

10 x CA: CALCIUM ION(Non-covalent)

CA.1: 6 residues within 4Å: Chain A: D.60, N.61, E.138, Q.139, D.140 Ligands: CA.2 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.60, A:E.138, A:E.138, A:Q.139, A:D.140 CA.2: 5 residues within 4Å: Chain A: E.138, D.140, E.147, Q.150 Ligands: CA.1 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.138, A:D.140, A:D.140, A:E.147 CA.3: 5 residues within 4Å: Chain B: D.60, N.61, E.138, Q.139, D.140 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:D.60, B:E.138, B:Q.139, B:D.140 CA.4: 4 residues within 4Å: Chain B: E.138, D.140, E.147, Q.150 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:E.138, B:D.140, B:D.140, B:E.147 CA.5: 6 residues within 4Å: Chain C: D.60, N.61, E.138, Q.139, D.140 Ligands: CA.6 5 PLIP interactions: 5 interactions with chain C Metal complexes: C:D.60, C:E.138, C:E.138, C:Q.139, C:D.140 CA.6: 5 residues within 4Å: Chain C: E.138, D.140, E.147, Q.150 Ligands: CA.5 4 PLIP interactions: 3 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:E.138, C:D.140, C:E.147, H2O.2 CA.7: 5 residues within 4Å: Chain D: D.60, N.61, E.138, Q.139, D.140 5 PLIP interactions: 5 interactions with chain D Metal complexes: D:D.60, D:E.138, D:E.138, D:Q.139, D:D.140 CA.8: 4 residues within 4Å: Chain D: E.138, D.140, E.147, Q.150 3 PLIP interactions: 3 interactions with chain D Metal complexes: D:E.138, D:D.140, D:E.147 CA.9: 5 residues within 4Å: Chain E: D.60, N.61, E.138, Q.139, D.140 4 PLIP interactions: 4 interactions with chain E Metal complexes: E:D.60, E:E.138, E:Q.139, E:D.140 CA.10: 4 residues within 4Å: Chain E: E.138, D.140, E.147, Q.150 4 PLIP interactions: 4 interactions with chain E Metal complexes: E:E.138, E:D.140, E:D.140, E:E.147

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Guillon, C. et al., A Staggered Decameric Assembly of Human C-Reactive Protein Stabilized by Zinc Ions Revealed by X-ray Crystallography. Protein Pept.Lett. (2014)

Release Date

2012-01-11

Peptides

C-Reactive Protein: ABCDE

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
F

B
G

C
H

D
I

E
J

C-Reactive Protein

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