SMTL ID : 3pzo.1

Structure of the hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1 in complex with three maltose molecules

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

monomer

Ligands

2 x GLC- GLC: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose(Non-covalent)

GLC-GLC.1: 4 residues within 4Å: Chain A: N.42, D.46, Y.104, K.108 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.42 Water bridges: A:Y.169, A:Y.169 GLC-GLC.2: 8 residues within 4Å: Chain A: W.124, D.126, E.188, R.190, E.225, Y.270, H.273, W.274 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:E.188, A:R.190, A:H.273, A:W.274 Water bridges: A:H.273

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 5 residues within 4Å: Chain A: Y.71, K.75, D.126, F.127 Ligands: GOL.4 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:K.75, A:F.127 Water bridges: A:Y.35, A:D.74, A:D.74, A:K.75 GOL.4: 6 residues within 4Å: Chain A: Y.35, W.63, D.126, F.127, W.340 Ligands: GOL.3 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:W.63 Water bridges: A:D.126

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Santos, C.R. et al., Structural characterization of a novel hyperthermostable endo-1,4-beta-D-mannanase from Thermotoga petrophila RKU-1. To be Published

Release Date

2011-12-28

Peptides

Mannan endo-1,4-beta-mannosidase. Glycosyl Hydrolase family 5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mannan endo-1,4-beta-mannosidase. Glycosyl Hydrolase family 5

Related Entries With Identical Sequence