- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.40 Å
- Oligo State
- homo-dimer
- Ligands
- 3 x MG: MAGNESIUM ION(Non-covalent)
- 4 x DMA: DIMETHYLALLYL DIPHOSPHATE(Non-covalent)
DMA.3: 11 residues within 4Å:- Chain A: G.55, K.56, R.59, H.94, L.98, R.113, T.196, F.233, Q.234, D.237
- Ligands: DMA.4
17 PLIP interactions:17 interactions with chain A- Hydrophobic interactions: A:L.98, A:T.196, A:F.233
- Hydrogen bonds: A:K.56
- Water bridges: A:K.56, A:R.57, A:R.57, A:R.59, A:K.251, A:K.251, A:K.251
- Salt bridges: A:K.56, A:K.56, A:R.59, A:H.94, A:H.94, A:R.113
DMA.4: 14 residues within 4Å:- Chain A: S.97, L.98, D.101, D.107, R.112, M.168, Q.172, K.195, Q.234, D.237, K.251
- Ligands: MG.1, MG.2, DMA.3
15 PLIP interactions:15 interactions with chain A- Hydrophobic interactions: A:L.98, A:D.101, A:Q.172, A:K.195
- Hydrogen bonds: A:Q.234
- Water bridges: A:D.101, A:Q.172, A:K.251, A:K.259, A:K.259, A:K.259
- Salt bridges: A:R.112, A:K.195, A:K.251, A:K.259
DMA.9: 11 residues within 4Å:- Chain B: G.55, K.56, R.59, H.94, L.98, R.113, T.196, F.233, Q.234, D.237
- Ligands: DMA.10
12 PLIP interactions:12 interactions with chain B- Hydrophobic interactions: B:L.98, B:T.196, B:F.233
- Hydrogen bonds: B:K.56
- Water bridges: B:R.57, B:F.58, B:R.59, B:R.59
- Salt bridges: B:R.59, B:H.94, B:H.94, B:R.113
DMA.10: 12 residues within 4Å:- Chain B: S.97, L.98, D.101, D.107, R.112, M.168, Q.172, K.195, D.237, K.251
- Ligands: MG.8, DMA.9
10 PLIP interactions:10 interactions with chain B- Hydrophobic interactions: B:L.98, B:D.101, B:Q.172
- Hydrogen bonds: B:D.101, B:D.237
- Water bridges: B:R.112, B:K.195
- Salt bridges: B:R.112, B:K.195, B:K.251
- 3 x SO4: SULFATE ION(Non-functional Binders)
SO4.5: 7 residues within 4Å:- Chain A: A.69, L.70, A.292, Y.293, P.294, L.295, L.296
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:Y.293, A:L.295, A:L.296
SO4.6: 2 residues within 4Å:- Chain A: N.20, R.24
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:N.20
- Salt bridges: A:R.24
SO4.7: 3 residues within 4Å:- Chain A: S.27, K.30, N.31
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:N.31
- Salt bridges: A:K.30
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wallrapp, F.H. et al., Prediction of function for the polyprenyl transferase subgroup in the isoprenoid synthase superfamily. Proc.Natl.Acad.Sci.USA (2013)
- Release Date
- 2011-01-12
- Peptides
- Geranyltranstransferase (IspA): AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.40 Å
- Oligo State
- homo-dimer
- Ligands
- 3 x MG: MAGNESIUM ION(Non-covalent)
- 4 x DMA: DIMETHYLALLYL DIPHOSPHATE(Non-covalent)
- 3 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wallrapp, F.H. et al., Prediction of function for the polyprenyl transferase subgroup in the isoprenoid synthase superfamily. Proc.Natl.Acad.Sci.USA (2013)
- Release Date
- 2011-01-12
- Peptides
- Geranyltranstransferase (IspA): AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D