SMTL ID : 3q27.1

Cyrstal structure of human alpha-synuclein (32-57) fused to maltose binding protein (MBP)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

monomer

Ligands

1 x GLC- GLC: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose(Non-covalent)

GLC-GLC.1: 15 residues within 4Å: Chain A: D.15, K.16, W.63, A.64, D.66, R.67, E.112, E.154, P.155, Y.156, F.157, W.231, M.331, W.341, R.345 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:W.63, A:R.67, A:R.67, A:E.154, A:Y.156, A:R.345

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: P.41, D.42, K.47 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.42 Water bridges: A:K.47 Salt bridges: A:K.47 SO4.3: 5 residues within 4Å: Chain A: N.151, Q.153, E.154, D.210, Y.211 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.151, A:Y.211 Water bridges: A:D.210, A:D.210, A:S.212 SO4.4: 3 residues within 4Å: Chain A: G.14, H.40, D.42 4 PLIP interactions: 4 interactions with chain A Water bridges: A:G.14, A:H.40, A:H.40 Salt bridges: A:H.40

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 4 residues within 4Å: Chain A: Y.168, F.170, K.171, Y.172 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:F.170, A:Y.172, A:Y.172 Water bridges: A:G.166, A:K.171, A:K.171

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhao, M. et al., Structures of segments of alpha-synuclein fused to maltose-binding protein suggest intermediate states during amyloid formation. Protein Sci. (2011)

Release Date

2011-06-01

Peptides

Maltose-binding periplasmic protein/alpha-synuclein chimeric protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Maltose-binding periplasmic protein/alpha-synuclein chimeric protein