SMTL ID : 3q28.1

Cyrstal structure of human alpha-synuclein (58-79) fused to maltose binding protein (MBP)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x GLC- GLC: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose(Non-covalent)

GLC-GLC.1: 12 residues within 4Å: Chain A: K.16, W.63, A.64, D.66, R.67, E.112, E.154, P.155, Y.156, W.231, W.341, R.345 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:W.63, A:R.67, A:R.67, A:E.154, A:Y.156, A:R.345 Water bridges: A:E.45, A:D.66

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: N.151, Q.153, E.154, D.210, Y.211 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.151, A:Y.211 Water bridges: A:D.210, A:D.210, A:S.212 SO4.3: 3 residues within 4Å: Chain A: P.41, D.42, K.47 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.42, A:D.42 Water bridges: A:K.47, A:K.47 Salt bridges: A:K.47 SO4.4: 2 residues within 4Å: Chain A: D.83, K.84 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.84 Salt bridges: A:K.84 SO4.5: 3 residues within 4Å: Chain A: N.13, D.42, K.43 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.43 Water bridges: A:N.13, A:G.14, A:E.45

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhao, M. et al., Structures of segments of alpha-synuclein fused to maltose-binding protein suggest intermediate states during amyloid formation. Protein Sci. (2011)

Release Date

2011-06-01

Peptides

Maltose-binding periplasmic protein/alpha-synuclein chimeric protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Maltose-binding periplasmic protein/alpha-synuclein chimeric protein