SMTL ID : 3q4s.1

Crystal Structure of Human Glycogenin-1 (GYG1), apo form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.98 Å

Oligo State

homo-dimer

Ligands

18 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 4 residues within 4Å: Chain A: D.4, T.94, Q.95, S.97 Ligand excluded by PLIP EDO.2: 5 residues within 4Å: Chain A: L.10, T.11, T.12, Y.16, V.83 Ligand excluded by PLIP EDO.3: 2 residues within 4Å: Chain A: S.45, D.46 Ligand excluded by PLIP EDO.4: 5 residues within 4Å: Chain A: E.120, L.121, S.174, W.175, K.182 Ligand excluded by PLIP EDO.5: 4 residues within 4Å: Chain A: S.92, T.94, Q.95 Ligands: EDO.7 Ligand excluded by PLIP EDO.6: 5 residues within 4Å: Chain A: R.118, I.180, H.183, P.185 Chain B: T.177 Ligand excluded by PLIP EDO.7: 5 residues within 4Å: Chain A: I.60, H.89, S.92, L.93 Ligands: EDO.5 Ligand excluded by PLIP EDO.8: 1 residues within 4Å: Chain A: Q.263 Ligand excluded by PLIP EDO.9: 10 residues within 4Å: Chain A: P.125, P.130, D.131, W.175, H.183 Chain B: P.125, P.130, W.175, H.183 Ligands: EDO.19 Ligand excluded by PLIP EDO.11: 4 residues within 4Å: Chain B: D.4, T.94, Q.95, S.97 Ligand excluded by PLIP EDO.12: 5 residues within 4Å: Chain B: L.10, T.11, T.12, Y.16, V.83 Ligand excluded by PLIP EDO.13: 2 residues within 4Å: Chain B: S.45, D.46 Ligand excluded by PLIP EDO.14: 5 residues within 4Å: Chain B: E.120, L.121, S.174, W.175, K.182 Ligand excluded by PLIP EDO.15: 4 residues within 4Å: Chain B: S.92, T.94, Q.95 Ligands: EDO.17 Ligand excluded by PLIP EDO.16: 5 residues within 4Å: Chain A: T.177 Chain B: R.118, I.180, H.183, P.185 Ligand excluded by PLIP EDO.17: 5 residues within 4Å: Chain B: I.60, H.89, S.92, L.93 Ligands: EDO.15 Ligand excluded by PLIP EDO.18: 1 residues within 4Å: Chain B: Q.263 Ligand excluded by PLIP EDO.19: 10 residues within 4Å: Chain A: P.125, P.130, W.175, H.183 Chain B: P.125, P.130, D.131, W.175, H.183 Ligands: EDO.9 Ligand excluded by PLIP

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.10: 3 residues within 4Å: Chain A: I.180 Chain B: I.180 Ligands: CL.20 Ligand excluded by PLIP CL.20: 3 residues within 4Å: Chain A: I.180 Chain B: I.180 Ligands: CL.10 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chaikuad, A. et al., Conformational plasticity of glycogenin and its maltosaccharide substrate during glycogen biogenesis. Proc.Natl.Acad.Sci.USA (2011)

Release Date

2011-02-09

Peptides

Glycogenin-1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Glycogenin-1

Related Entries With Identical Sequence