SMTL ID : 3q5i.1

Crystal Structure of PBANKA_031420

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

6 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: D.365, N.367, D.369, Q.371, E.376 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.365, A:D.369, A:Q.371, A:E.376, H2O.1 CA.2: 4 residues within 4Å: Chain A: E.12, Y.15, F.16, Q.17 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.12, A:Y.15, A:F.16, H2O.1 CA.3: 6 residues within 4Å: Chain A: D.409, D.411, N.413, Y.415, E.417, E.420 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.409, A:D.411, A:Y.415, A:E.417, A:E.420 CA.4: 5 residues within 4Å: Chain A: D.445, D.447, S.449, K.451, E.456 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.445, A:K.451, A:E.456, A:E.456, H2O.1 CA.5: 5 residues within 4Å: Chain A: D.479, N.481, D.483, M.485, E.490 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.479, A:D.483, A:M.485, A:E.490, H2O.1 CA.6: 3 residues within 4Å: Chain A: N.176, D.192 Ligands: ANP.7 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.192, H2O.1, H2O.1

1 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)

ANP.7: 16 residues within 4Å: Chain A: L.44, S.46, V.52, A.65, K.67, I.109, T.125, E.126, F.127, Y.128, E.132, N.176, L.178, D.192 Ligands: CA.6, MG.8 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:K.67, A:T.125, A:E.126, A:Y.128, A:E.132, A:E.132 Water bridges: A:D.192

1 x MG: MAGNESIUM ION(Non-covalent)

MG.8: 2 residues within 4Å: Chain A: D.192 Ligands: ANP.7 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.192, A:D.192, H2O.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wernimont, A.K. et al., Crystal Structure of CDPK1 from Plasmodium Bergheii, PBANKA_031420. To be Published

Release Date

2011-06-01

Peptides

Protein kinase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein kinase