SMTL ID : 3q7c.1

Exonuclease domain of Lassa virus nucleoprotein bound to manganese

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: E.73, H.86, C.180, H.183, C.203 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.73, A:C.180, A:H.183, A:C.203

1 x MN: MANGANESE (II) ION(Non-covalent)

MN.2: 4 residues within 4Å: Chain A: D.63, I.64, E.65, D.207 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.63, A:E.65, A:D.207, H2O.5, H2O.8

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.3: 4 residues within 4Å: Chain A: Y.84, H.86, L.179, A.226 2 PLIP interactions: 2 interactions with chain A Water bridges: A:H.86 Salt bridges: A:H.86

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hastie, K.M. et al., Structure of the Lassa virus nucleoprotein reveals a dsRNA-specific 3' to 5' exonuclease activity essential for immune suppression. Proc.Natl.Acad.Sci.USA (2011)

Release Date

2011-02-09

Peptides

Nucleoprotein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Nucleoprotein

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