SMTL ID : 3qaz.6 (11 other biounits)

IL-2 mutant D10 ternary complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.80 Å

Oligo State

hetero-1-1-1-mer

Ligands

6 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)(Non-functional Binders)

NAG.1: 4 residues within 4Å: Chain B: V.118, N.126, W.169 Ligands: NAG.2 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:W.169 Hydrogen bonds: B:N.126 NAG.2: 3 residues within 4Å: Chain B: W.169 Chain C: E.147 Ligands: NAG.1 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:E.147 NAG.3: 5 residues within 4Å: Chain C: F.13, Y.17, N.19, L.54 Ligands: NAG.4 3 PLIP interactions: 3 interactions with chain C Hydrophobic interactions: C:F.13 Hydrogen bonds: C:Y.17, C:N.19 NAG.4: 1 residues within 4Å: Ligands: NAG.3 No protein-ligand interaction detected (PLIP) NAG.5: 2 residues within 4Å: Chain C: N.32, E.58 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:N.32, C:E.58 NAG.6: 1 residues within 4Å: Chain C: N.107 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:N.107

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Levin, A.M. et al., Exploiting a natural conformational switch to engineer an interleukin-2 'superkine. Nature (2012)

Release Date

2012-04-11

Peptides

Interleukin-2: A
Interleukin-2 receptor subunit beta: B
Cytokine receptor common subunit gamma: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
P

B
Q

C
R

Interleukin-2

Interleukin-2 receptor subunit beta

Cytokine receptor common subunit gamma

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