SMTL ID : 3qcm.1 (1 other biounit)

Human receptor protein tyrosine phosphatase gamma, domain 1, in complex with 2-[(3,4-dichlorobenzyl)sulfanyl]-4-{[3-({N-[2-(methylamino)ethyl]glycyl}amino)phenyl]ethynyl}benzoic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x NXW: 2-[(3,4-dichlorobenzyl)sulfanyl]-4-{[3-({N-[2-(methylamino)ethyl]glycyl}amino)phenyl]ethynyl}benzoic acid(Non-covalent)

NXW.1: 17 residues within 4Å: Chain A: Y.23, Q.27, I.132, Y.205, W.208, V.213, P.214, V.220, F.223, R.248, T.251, Y.252, E.288, E.289, Q.290, I.292, F.293 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:I.132, A:W.208, A:V.213, A:V.213, A:P.214, A:V.220, A:T.251, A:I.292, A:F.293, A:F.293 Hydrogen bonds: A:Q.27, A:E.288, A:Q.290 Salt bridges: A:R.248 pi-Stacking: A:Y.205

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.2: 7 residues within 4Å: Chain A: Y.62, N.64, I.65, K.142, S.243, A.244, Q.286 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:N.64, A:S.243, A:A.244 Water bridges: A:S.243, A:S.243, A:G.245, A:G.247, A:Q.290 Salt bridges: A:K.142

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sheriff, S. et al., Small molecule receptor protein tyrosine phosphatase [gamma](RPTP[gamma]) ligands that inhibit phosphatase activity via perturbation of the tryptophan-proline-aspartate (WPD) loop. J.Med.Chem. (2011)

Release Date

2011-12-28

Peptides

Receptor-type tyrosine-protein phosphatase gamma: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Receptor-type tyrosine-protein phosphatase gamma

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