SMTL ID : 3qd6.2 (1 other biounit)

Crystal structure of the CD40 and CD154 (CD40L) complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.50 Å

Oligo State

hetero-3-2-mer

Ligands

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 6 residues within 4Å: Chain A: S.24, C.82, E.90, N.128, V.129, T.130 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.24 NAG.2: 5 residues within 4Å: Chain B: T.23, V.25, C.82, E.90, N.128 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:V.25 Hydrogen bonds: B:N.128 NAG.3: 8 residues within 4Å: Chain C: S.80, C.82, E.90, R.91, I.92, N.128, V.129, T.130 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

An, H.-J. et al., Crystallographic and mutational analysis of the CD40-CD154 complex and its implications for receptor activation. J.Biol.Chem. (2011)

Release Date

2011-02-02

Peptides

CD40 ligand: ABC
Tumor necrosis factor receptor superfamily member 5: DE

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
E

C
F

D
T

E
U

CD40 ligand

Tumor necrosis factor receptor superfamily member 5

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