SMTL ID : 3qde.1

The structure of Cellobiose phosphorylase from Clostridium thermocellum in complex with phosphate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 7 residues within 4Å: Chain A: R.344, W.481, H.653, Q.699, T.718, G.719 Ligands: 144.2 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:Q.699, A:G.719 Water bridges: A:R.344, A:H.653, A:T.718, A:T.718 Salt bridges: A:R.344, A:H.653 PO4.3: 6 residues within 4Å: Chain B: R.344, H.653, Q.699, T.718, G.719 Ligands: 144.4 9 PLIP interactions: 9 interactions with chain B Hydrogen bonds: B:Q.699, B:T.718, B:T.718, B:G.719 Water bridges: B:D.361, B:T.720, B:T.720 Salt bridges: B:R.344, B:H.653

2 x 144: TRIS-HYDROXYMETHYL-METHYL-AMMONIUM(Non-covalent)

144.2: 7 residues within 4Å: Chain A: W.481, N.482, D.483, E.646, F.651, Q.699 Ligands: PO4.1 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:W.481, A:D.483, A:D.483, A:E.646 Water bridges: A:R.355, A:R.360, A:Q.699, A:Q.699, A:G.719 Salt bridges: A:D.483, A:E.646 pi-Cation interactions: A:W.481, A:W.481 144.4: 7 residues within 4Å: Chain B: W.481, N.482, D.483, E.646, F.651, Q.699 Ligands: PO4.3 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:W.481, B:N.482, B:D.483, B:Q.699 Water bridges: B:R.360 Salt bridges: B:D.483, B:E.646 pi-Cation interactions: B:W.481

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bianchetti, C.M. et al., Structure of cellobiose phosphorylase from Clostridium thermocellum in complex with phosphate. Acta Crystallogr.,Sect.F (2011)

Release Date

2011-11-09

Peptides

Cellobiose phosphorylase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Cellobiose phosphorylase