SMTL ID : 3qdf.1

Crystal structure of 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase from Mycobacterium marinum

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: E.121, E.123, D.152, K.169 Ligands: EDO.3 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.121, A:E.123, A:D.152, H2O.6 ZN.2: 2 residues within 4Å: Chain A: E.191, H.203 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:E.191, A:E.191, A:H.203

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 10 residues within 4Å: Chain A: V.70, G.71, F.95, E.121, E.123, D.152, R.156, Q.159, K.169 Ligands: ZN.1 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.156, A:Q.159, A:K.169 Water bridges: A:G.235, A:T.236 EDO.4: 5 residues within 4Å: Chain A: P.28, P.179, W.180, G.257, T.258 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:T.258 Water bridges: A:G.257, A:T.258, A:T.258 EDO.5: 5 residues within 4Å: Chain A: K.133, D.134, S.221, A.222, V.223 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.134, A:D.134, A:V.223

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Baugh, L. et al., Increasing the structural coverage of tuberculosis drug targets. Tuberculosis (Edinb) (2015)

Release Date

2011-02-02

Peptides

2-hydroxyhepta-2,4-diene-1,7-dioate isomerase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

2-hydroxyhepta-2,4-diene-1,7-dioate isomerase