SMTL ID : 3qfc.1 (1 other biounit)

Crystal Structure of Human NADPH-Cytochrome P450 (V492E mutant)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 20 residues within 4Å: Chain A: H.260, R.365, R.395, Y.396, Y.397, S.398, C.413, A.414, V.415, V.417, Y.419, G.429, E.430, A.431, T.432, T.476, A.479, D.615, W.617 Ligands: FMN.2 24 PLIP interactions: 24 interactions with chain A Hydrophobic interactions: A:W.617, A:W.617, A:W.617 Hydrogen bonds: A:R.365, A:Y.396, A:Y.396, A:Y.397, A:S.398, A:C.413, A:V.415, A:E.430, A:A.431, A:T.432, A:T.476 Water bridges: A:R.395, A:R.395, A:C.413 Salt bridges: A:R.395, A:R.395 pi-Stacking: A:Y.397, A:Y.419, A:Y.419, A:W.617, A:W.617

1 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)

FMN.2: 21 residues within 4Å: Chain A: S.27, Q.28, T.29, G.30, T.31, A.32, A.79, T.80, Y.81, G.82, G.84, L.114, G.115, N.116, Y.119, H.121, F.122, N.123, D.149, L.153 Ligands: FAD.1 22 PLIP interactions: 22 interactions with chain A Hydrophobic interactions: A:Y.81, A:Y.81 Hydrogen bonds: A:Q.28, A:T.29, A:T.29, A:T.31, A:T.31, A:A.32, A:T.80, A:T.80, A:Y.81, A:Y.81, A:E.83, A:G.84, A:N.116, A:H.121, A:N.123, A:D.149 Water bridges: A:T.31, A:H.121, A:D.149 pi-Stacking: A:Y.119

1 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.3: 15 residues within 4Å: Chain A: R.239, P.474, G.475, T.476, G.506, C.507, R.508, S.537, R.538, K.543, Y.545, Q.547, N.575, M.576, D.579 18 PLIP interactions: 18 interactions with chain A Hydrogen bonds: A:T.476, A:C.507, A:S.537, A:S.537, A:Q.547, A:D.579, A:D.579 Water bridges: A:R.239, A:R.239, A:S.537, A:V.546 Salt bridges: A:R.239, A:R.239, A:R.508, A:R.538, A:K.543 pi-Stacking: A:Y.545, A:Y.545

1 x CA: CALCIUM ION(Non-covalent)

CA.4: 1 residues within 4Å: Chain A: N.533 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xia, C. et al., Structural basis for human NADPH-cytochrome P450 oxidoreductase deficiency. Proc.Natl.Acad.Sci.USA (2011)

Release Date

2011-08-03

Peptides

NADPH--cytochrome P450 reductase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

NADPH--cytochrome P450 reductase

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