SMTL ID : 3qi0.10 (9 other biounits)

Structural, thermodynamic and kinetic analysis of the picomolar binding affinity interaction of the beta-lactamase inhibitor protein-II (BLIP-II) with class A beta-lactamases

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-hexamer

Ligands

35 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: P.58, A.59, A.60 Ligand excluded by PLIP SO4.2: 2 residues within 4Å: Chain A: P.19, A.20 Ligand excluded by PLIP SO4.3: 3 residues within 4Å: Chain A: W.7, G.8, G.9 Ligand excluded by PLIP SO4.4: 3 residues within 4Å: Chain A: A.49, N.50, L.51 Ligand excluded by PLIP SO4.5: 2 residues within 4Å: Chain A: P.136, A.137 Ligand excluded by PLIP SO4.6: 3 residues within 4Å: Chain A: V.174, P.175, A.176 Ligand excluded by PLIP SO4.7: 4 residues within 4Å: Chain A: G.8, G.9, S.244, R.246 Ligand excluded by PLIP SO4.8: 2 residues within 4Å: Chain B: P.58, A.59 Ligand excluded by PLIP SO4.9: 2 residues within 4Å: Chain B: P.19, A.20 Ligand excluded by PLIP SO4.10: 2 residues within 4Å: Chain B: P.136, A.137 Ligand excluded by PLIP SO4.11: 3 residues within 4Å: Chain B: W.7, G.8, G.9 Ligand excluded by PLIP SO4.12: 2 residues within 4Å: Chain B: P.175, A.176 Ligand excluded by PLIP SO4.13: 2 residues within 4Å: Chain B: E.138, K.157 Ligand excluded by PLIP SO4.14: 5 residues within 4Å: Chain B: P.97, A.98, R.101 Chain C: S.254, K.270 Ligand excluded by PLIP SO4.15: 3 residues within 4Å: Chain B: G.8, G.9, R.246 Ligand excluded by PLIP SO4.16: 3 residues within 4Å: Chain C: P.97, A.98, E.99 Ligand excluded by PLIP SO4.17: 2 residues within 4Å: Chain C: T.173, V.174 Ligand excluded by PLIP SO4.18: 2 residues within 4Å: Chain C: P.136, A.137 Ligand excluded by PLIP SO4.19: 2 residues within 4Å: Chain C: P.58, A.59 Ligand excluded by PLIP SO4.20: 2 residues within 4Å: Chain D: P.58, A.59 Ligand excluded by PLIP SO4.21: 2 residues within 4Å: Chain D: P.136, A.137 Ligand excluded by PLIP SO4.22: 2 residues within 4Å: Chain D: P.97, A.98 Ligand excluded by PLIP SO4.23: 3 residues within 4Å: Chain D: G.8, G.9, R.246 Ligand excluded by PLIP SO4.24: 2 residues within 4Å: Chain D: T.173, V.174 Ligand excluded by PLIP SO4.25: 7 residues within 4Å: Chain D: S.254, G.255, K.270 Chain F: V.96, P.97, A.98, R.101 Ligand excluded by PLIP SO4.26: 2 residues within 4Å: Chain E: P.58, A.59 Ligand excluded by PLIP SO4.27: 4 residues within 4Å: Chain A: R.101 Chain E: S.254, G.255, K.270 Ligand excluded by PLIP SO4.28: 3 residues within 4Å: Chain E: Y.208, W.229, S.244 Ligand excluded by PLIP SO4.29: 4 residues within 4Å: Chain E: G.8, G.9, S.244, R.246 Ligand excluded by PLIP SO4.30: 3 residues within 4Å: Chain E: P.136, A.137, E.138 Ligand excluded by PLIP SO4.31: 3 residues within 4Å: Chain E: S.102, G.103, K.118 Ligand excluded by PLIP SO4.32: 3 residues within 4Å: Chain E: S.63, G.64, K.79 Ligand excluded by PLIP SO4.33: 3 residues within 4Å: Chain E: P.97, A.98, E.99 Ligand excluded by PLIP SO4.34: 5 residues within 4Å: Chain F: G.8, G.9, S.244, S.245, R.246 Ligand excluded by PLIP SO4.35: 2 residues within 4Å: Chain F: P.136, A.137 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Brown, N.G. et al., Analysis of the binding forces driving the tight interactions between beta-lactamase inhibitory protein-II (BLIP-II) and class A beta-lactamases. J.Biol.Chem. (2011)

Release Date

2011-07-20

Peptides

Beta-lactamase inhibitory protein II: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

Beta-lactamase inhibitory protein II

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