- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- monomer
- Ligands
- 7 x GOL: GLYCEROL(Non-functional Binders)
- 7 x ACT: ACETATE ION(Non-functional Binders)
ACT.5: 1 residues within 4Å:- Chain A: R.457
1 PLIP interactions:1 interactions with chain A- Salt bridges: A:R.457
ACT.7: 3 residues within 4Å:- Chain A: N.482, Q.496, K.498
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:N.482
- Water bridges: A:K.498
ACT.9: 3 residues within 4Å:- Chain A: N.261, E.262, L.263
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:L.263
ACT.10: 2 residues within 4Å:- Chain A: N.235, A.237
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:A.237
- Hydrogen bonds: A:N.235
ACT.11: 2 residues within 4Å:- Chain A: Y.485, A.486
No protein-ligand interaction detected (PLIP)ACT.12: 1 residues within 4Å:- Chain A: N.281
No protein-ligand interaction detected (PLIP)ACT.14: 5 residues within 4Å:- Chain A: P.11, G.219, N.220, G.222, L.223
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:P.11
- Hydrogen bonds: A:N.220
- 3 x SO4: SULFATE ION(Non-functional Binders)
SO4.15: 3 residues within 4Å:- Chain A: T.23, P.24, Q.26
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:T.23, A:T.23, A:Q.26
SO4.16: 5 residues within 4Å:- Chain A: Q.385, F.394, H.395, R.396
- Ligands: GOL.6
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:Y.382, A:Q.385, A:R.396
- Water bridges: A:H.395
- Salt bridges: A:H.395
SO4.17: 4 residues within 4Å:- Chain A: K.330, D.331, I.332, R.365
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:D.331, A:I.332
- Salt bridges: A:K.330, A:R.365
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Cavazza, C. et al., Histidine 416 of the periplasmic binding protein NikA is essential for nickel uptake in Escherichia coli. Febs Lett. (2011)
- Release Date
- 2011-03-02
- Peptides
- Nickel-binding periplasmic protein: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.10 Å
- Oligo State
- monomer
- Ligands
- 7 x GOL: GLYCEROL(Non-functional Binders)
- 7 x ACT: ACETATE ION(Non-functional Binders)
- 3 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Cavazza, C. et al., Histidine 416 of the periplasmic binding protein NikA is essential for nickel uptake in Escherichia coli. Febs Lett. (2011)
- Release Date
- 2011-03-02
- Peptides
- Nickel-binding periplasmic protein: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
A