SMTL ID : 3qlj.2 (2 other biounits)

Crystal structure of a short chain dehydrogenase from Mycobacterium avium

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 3 residues within 4Å: Chain A: R.128, M.129, N.132 Ligand excluded by PLIP

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 7 residues within 4Å: Chain A: Q.290 Chain B: S.223, E.273, V.274, E.275, K.278, R.280 2 PLIP interactions: 1 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:Q.290 Water bridges: B:E.273 EDO.4: 8 residues within 4Å: Chain A: G.182, A.197, T.201, W.285 Chain B: G.182, A.197, T.201, W.285 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:T.201, B:A.197, B:T.201 EDO.5: 7 residues within 4Å: Chain A: S.223, E.273, V.274, E.275, K.278, R.280 Chain B: Q.290 6 PLIP interactions: 5 interactions with chain A, 1 interactions with chain B Water bridges: A:E.273, A:K.278, A:K.278, A:R.280, A:R.280 Hydrogen bonds: B:Q.290

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Baugh, L. et al., Increasing the structural coverage of tuberculosis drug targets. Tuberculosis (Edinb) (2015)

Release Date

2011-02-16

Peptides

Short chain dehydrogenase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Short chain dehydrogenase

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