SMTL ID : 3qmh.1

Structural Basis of Selective Binding of Non-Methylated CpG islands (DNA-TCGA) by the CXXC Domain of CFP1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: C.26, G.27, C.29, C.32, C.65, Q.66 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.26, A:C.29, A:C.32, A:C.65 ZN.2: 6 residues within 4Å: Chain A: C.38, G.39, C.41, C.44, C.60, R.61 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.38, A:C.41, A:C.44, A:C.60

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, C. et al., The structural basis for selective binding of non-methylated CpG islands by the CFP1 CXXC domain. Nat Commun (2011)

Release Date

2011-02-23

Peptides

CpG-binding protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

CpG-binding protein

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