SMTL ID : 3qow.1

DOT1L Structure in complex with SAM

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x SAM: S-ADENOSYLMETHIONINE(Non-covalent)

SAM.1: 21 residues within 4Å: Chain A: P.143, V.145, Y.146, G.147, E.148, T.149, D.171, G.173, S.174, Q.178, V.179, V.195, E.196, K.197, A.198, G.231, D.232, F.233, F.249, N.251, F.255 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:T.149, A:T.149, A:G.173, A:Q.178, A:K.197, A:D.232, A:D.232, A:F.233, A:N.251 Water bridges: A:E.144, A:S.174, A:Q.178 pi-Stacking: A:F.233

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 2 residues within 4Å: Chain A: R.213, H.223 3 PLIP interactions: 3 interactions with chain A Water bridges: A:R.213 Salt bridges: A:R.213, A:H.223 SO4.3: 4 residues within 4Å: Chain A: R.239, Q.262, E.265, R.266 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.262 Salt bridges: A:R.239, A:R.266

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Richon, V.M. et al., Chemogenetic analysis of human protein methyltransferases. Chem.Biol.Drug Des. (2011)

Release Date

2011-05-25

Peptides

Histone-lysine N-methyltransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Histone-lysine N-methyltransferase

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