SMTL ID : 3qox.1

DOT1L structure in complex with SAH

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)

SAH.1: 21 residues within 4Å: Chain A: P.143, E.144, V.145, Y.146, G.147, E.148, T.149, D.171, G.173, S.174, Q.178, V.179, E.196, K.197, A.198, G.231, D.232, F.233, F.249, N.251, F.255 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:T.149, A:G.173, A:Q.178, A:K.197, A:D.232, A:F.233, A:N.251 Water bridges: A:E.144 pi-Stacking: A:F.233

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: R.213, K.217, H.223 3 PLIP interactions: 3 interactions with chain A Salt bridges: A:R.213, A:K.217, A:H.223 SO4.3: 3 residues within 4Å: Chain A: H.127, E.211, K.214 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.211 Salt bridges: A:H.127, A:K.214 SO4.4: 2 residues within 4Å: Chain A: T.110, R.111 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.111 SO4.5: 4 residues within 4Å: Chain A: R.239, Q.262, E.265, R.266 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.262 Salt bridges: A:R.239, A:R.266

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Richon, V.M. et al., Chemogenetic analysis of human protein methyltransferases. Chem.Biol.Drug Des. (2011)

Release Date

2011-05-25

Peptides

Histone-lysine N-methyltransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Histone-lysine N-methyltransferase

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