SMTL ID : 3qrc.1 (1 other biounit)

The crystal structure of Ail, the attachment invasion locus protein of Yersinia pestis, in complex with the heparin analogue sucrose octasulfate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

monomer

Ligands

1 x GU4- YYJ: 1,3,4,6-tetra-O-sulfo-beta-D-fructofuranose-(2-1)-2,3,4,6-tetra-O-sulfonato-alpha-D-glucopyranose(Non-covalent)

GU4-YYJ.1: 6 residues within 4Å: Chain A: K.70, Y.72, H.96, K.98, K.100, S.112 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.72, A:S.112, A:K.98 Water bridges: A:Y.72 Salt bridges: A:K.70, A:H.96, A:H.96, A:K.98, A:K.98, A:K.70, A:K.98, A:K.98

2 x C8E: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE(Non-functional Binders)

C8E.2: 3 residues within 4Å: Chain A: N.129, Y.155, R.156 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:N.129, A:Y.155, A:Y.155 C8E.3: 14 residues within 4Å: Chain A: V.16, E.18, Y.21, L.23, P.27, F.69, K.70, Y.71, K.98, R.111, S.112, K.113, D.143, V.144 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:V.16, A:P.27, A:F.69, A:Y.71 Hydrogen bonds: A:Y.21

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yamashita, S. et al., Structural Insights into Ail-Mediated Adhesion in Yersinia pestis. Structure (2011)

Release Date

2011-11-23

Peptides

Attachment invasion locus protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Attachment invasion locus protein

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