SMTL ID : 3qt3.1

Analysis of a New Family of Widely Distributed Metal-independent alpha-Mannosidases Provides Unique Insight into the Processing of N-linked Glycans, Clostridium perfringens CPE0426 apo-structure

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

monomer

Ligands

5 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 6 residues within 4Å: Chain A: R.64, D.65, P.218, N.302, F.408, W.410 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.65, A:P.218, A:N.302 Water bridges: A:R.64 EDO.2: 5 residues within 4Å: Chain A: N.38, T.42, Y.390, D.406, W.407 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:N.38, A:D.406 EDO.3: 5 residues within 4Å: Chain A: K.344, Q.364, E.373, Q.376, L.380 2 PLIP interactions: 2 interactions with chain A Water bridges: A:Q.364, A:Q.364 EDO.4: 3 residues within 4Å: Chain A: Y.103, L.171, V.174 1 PLIP interactions: 1 interactions with chain A Water bridges: A:L.171 EDO.5: 5 residues within 4Å: Chain A: N.92, V.95, K.96, N.158, D.160 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.96, A:N.158, A:N.158 Water bridges: A:N.92

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gregg, K.J. et al., Analysis of a New Family of Widely Distributed Metal-independent {alpha}-Mannosidases Provides Unique Insight into the Processing of N-Linked Glycans. J.Biol.Chem. (2011)

Release Date

2011-03-09

Peptides

Putative uncharacterized protein CPE0426: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Putative uncharacterized protein CPE0426

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