SMTL ID : 3qus.1

Crystal Structure of N10-Formyltetrahydrofolate Synthetase with ATPgS

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.84 Å

Oligo State

homo-dimer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: K.74, R.97, G.303, F.304 Ligands: AGS.5 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:F.304 Water bridges: A:K.74, A:K.74 Salt bridges: A:K.74, A:R.97 SO4.2: 4 residues within 4Å: Chain A: S.44, L.45, D.46, K.256 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.45 Salt bridges: A:K.256 SO4.3: 3 residues within 4Å: Chain A: R.175, R.178, G.535 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.535 Salt bridges: A:R.175, A:R.178 SO4.4: 3 residues within 4Å: Chain A: S.444, K.446, D.447 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.444, A:S.444, A:D.447 SO4.8: 5 residues within 4Å: Chain A: A.188 Chain B: R.175, R.178, M.531, G.535 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:G.535 Salt bridges: B:R.175, B:R.178 SO4.9: 5 residues within 4Å: Chain B: K.74, R.97, A.302, G.303, F.304 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:F.304 Salt bridges: B:K.74, B:R.97

2 x AGS: PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER(Non-covalent)

AGS.5: 13 residues within 4Å: Chain A: E.72, G.73, K.74, T.75, T.76, A.111, G.113, N.382, A.383, F.384, P.385, W.410 Ligands: SO4.1 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:G.73, A:K.74, A:T.75, A:T.76, A:T.76, A:A.383 Water bridges: A:K.74 Salt bridges: A:K.74 pi-Stacking: A:F.384, A:F.384, A:W.410, A:W.410, A:W.410 AGS.10: 11 residues within 4Å: Chain B: E.9, G.71, E.72, G.73, K.74, T.75, T.76, G.113, A.383, F.384, W.410 16 PLIP interactions: 16 interactions with chain B Hydrogen bonds: B:E.9, B:E.72, B:G.73, B:K.74, B:T.75, B:T.75, B:T.76, B:T.76, B:G.113, B:G.113, B:A.383 Salt bridges: B:K.74, B:K.74 pi-Stacking: B:W.410, B:W.410, B:W.410

2 x TOE: 2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXYL(Non-covalent)

TOE.6: 3 residues within 4Å: Chain A: R.162, I.164, E.194 No protein-ligand interaction detected (PLIP) TOE.7: 4 residues within 4Å: Chain A: R.224, L.478, G.479, Y.480 No protein-ligand interaction detected (PLIP)

2 x MAE: MALEIC ACID(Non-covalent)

MAE.11: 4 residues within 4Å: Chain B: S.44, L.45, K.252, K.256 6 PLIP interactions: 4 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:L.45, A:D.550, A:D.550 Salt bridges: B:K.252, B:K.256, B:K.256 MAE.12: 3 residues within 4Å: Chain B: R.162, I.164, E.194 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:R.162, B:E.194

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Celeste, L.R. et al., Crystal Strucutre of N10-Formyltetrahydrofolate Synthetase with ATPgS. To be Published

Release Date

2011-12-14

Peptides

Formate--tetrahydrofolate ligase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Formate--tetrahydrofolate ligase

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