SMTL ID : 3r04.1

The discovery of novel benzofuran-2-carboxylic acids as potent Pim-1 inhibitors

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x UNQ: 5-{6-[(trans-4-aminocyclohexyl)amino]pyrazin-2-yl}-1-benzofuran-2-carboxylic acid(Non-covalent)

UNQ.1: 13 residues within 4Å: Chain A: L.17, V.25, A.38, K.40, I.77, L.93, E.94, R.95, V.99, D.101, L.147, I.158, D.159 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:V.25, A:A.38, A:I.77, A:L.147, A:L.147, A:I.158 Hydrogen bonds: A:D.159 Water bridges: A:K.40, A:K.40, A:R.95, A:V.99, A:D.104, A:D.159, A:F.160 Salt bridges: A:K.40

3 x IMD: IMIDAZOLE(Non-covalent)

IMD.2: 3 residues within 4Å: Chain A: V.179, I.213, E.216 No protein-ligand interaction detected (PLIP) IMD.3: 7 residues within 4Å: Chain A: F.103, I.106, T.107, D.143, D.207, G.211, D.212 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.143 pi-Stacking: A:F.103 IMD.4: 2 residues within 4Å: Chain A: F.103, E.144 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.144 pi-Stacking: A:F.103

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xiang, Y. et al., The discovery of novel benzofuran-2-carboxylic acids as potent Pim-1 inhibitors. Bioorg.Med.Chem.Lett. (2011)

Release Date

2011-05-11

Peptides

Proto-oncogene serine/threonine-protein kinase pim-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Proto-oncogene serine/threonine-protein kinase pim-1

Related Entries With Identical Sequence