SMTL ID : 3r3t.1

Crystal Structure of 30S Ribosomal Protein S from Bacillus anthracis

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-tetramer

Ligands

4 x CA: CALCIUM ION(Non-covalent)

CA.1: 4 residues within 4Å: Chain A: A.82, K.83, N.85, I.88 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:A.82, A:K.83, A:N.85, A:I.88 CA.4: 4 residues within 4Å: Chain B: A.82, K.83, N.85, I.88 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:K.83, B:N.85, B:I.88 CA.5: 4 residues within 4Å: Chain C: A.82, K.83, N.85, I.88 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:A.82, C:K.83, C:N.85, C:I.88 CA.8: 4 residues within 4Å: Chain D: A.82, K.83, N.85, I.88 3 PLIP interactions: 3 interactions with chain D Metal complexes: D:K.83, D:N.85, D:I.88

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) GOL.6: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 8 residues within 4Å: Chain A: Y.53 Chain B: I.55, R.90 Chain C: Y.53, I.55 Chain D: I.55, R.90 Ligands: SO4.7 5 PLIP interactions: 1 interactions with chain D, 1 interactions with chain C, 2 interactions with chain B, 1 interactions with chain A Salt bridges: D:R.90, B:R.90 Hydrogen bonds: C:Y.53, B:D.57, A:Y.53 SO4.7: 8 residues within 4Å: Chain A: Y.53, I.55 Chain B: I.55, R.90 Chain C: Y.53 Chain D: I.55, R.90 Ligands: SO4.3 4 PLIP interactions: 1 interactions with chain D, 2 interactions with chain C, 1 interactions with chain B Salt bridges: D:R.90, B:R.90 Hydrogen bonds: C:Y.53, C:Y.53

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, Y. et al., Crystal Structure of 30S Ribosomal Protein S from Bacillus anthracis. To be Published

Release Date

2011-03-30

Peptides

30S ribosomal protein S6: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

30S ribosomal protein S6