SMTL ID : 3r5k.1

A designed redox-controlled caspase-7

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.86 Å

Oligo State

homo-dimer

Ligands

6 x FMT: FORMIC ACID(Non-functional Binders)

FMT.1: 6 residues within 4Å: Chain A: K.76, N.88, G.89, T.90, D.91, K.92 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.76, A:G.89, A:D.91, A:K.92 FMT.2: 7 residues within 4Å: Chain A: R.87, S.143, H.144, Q.184, C.186, S.232, R.234 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.87, A:H.144, A:Q.184, A:R.234 Water bridges: A:C.186 FMT.3: 5 residues within 4Å: Chain A: Y.212, K.213 Chain B: R.272, E.275, K.287 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:E.275, B:K.287, A:K.213 FMT.4: 7 residues within 4Å: Chain A: E.217 Chain B: D.192, T.226, V.227, Y.230, Q.288, I.289 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:D.192, B:I.289, B:I.289 FMT.5: 4 residues within 4Å: Chain B: K.255, Y.301, S.303, L.305 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:S.303, B:E.306 FMT.6: 6 residues within 4Å: Chain B: R.87, S.143, H.144, Q.184, C.186, R.234 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:R.87, B:Q.184, B:R.234, B:R.234

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Witkowski, W.A. et al., A designed redox-controlled caspase. Protein Sci. (2011)

Release Date

2011-06-29

Peptides

Caspase-7: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Caspase-7