SMTL ID : 3r5r.1 (4 other biounits)

Structure of Ddn, the Deazaflavin-dependent nitroreductase from Mycobacterium tuberculosis involved in bioreductive activation of PA-824, with co-factor F420

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x F42: COENZYME F420(Non-covalent)

F42.1: 18 residues within 4Å: Chain A: G.14, R.15, K.16, T.17, R.21, N.23, P.24, L.25, Y.26, A.37, A.38, S.39, K.40, P.47, M.48, W.49, N.52, Y.94 26 PLIP interactions: 26 interactions with chain A Hydrophobic interactions: A:K.16, A:R.21, A:P.24, A:L.25, A:M.48 Hydrogen bonds: A:K.16, A:T.17, A:N.23, A:N.23, A:P.24, A:Y.26, A:A.37, A:S.39, A:K.40, A:M.48, A:W.49, A:N.52 Water bridges: A:A.37, A:G.41, A:G.41 Salt bridges: A:R.15, A:R.21, A:R.21, A:K.40 pi-Stacking: A:Y.26, A:Y.26

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cellitti, S.E. et al., Structure of Ddn, the deazaflavin-dependent nitroreductase from Mycobacterium tuberculosis involved in bioreductive activation of PA-824. Structure (2012)

Release Date

2012-01-18

Peptides

Deazaflavin-dependent nitroreductase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Deazaflavin-dependent nitroreductase

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