SMTL ID : 3r6f.1

Crystal structure of a zinc-containing HIT family protein from Encephalitozoon cuniculi

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.8, C.11, H.48, H.93 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.8, A:C.11, A:H.48, A:H.93 ZN.4: 4 residues within 4Å: Chain B: C.8, C.11, H.48, H.93 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.8, B:C.11, B:H.48, B:H.93

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 7 residues within 4Å: Chain A: N.84, H.88, Q.89, E.90, V.91, H.95, H.97 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:N.84, A:E.90, A:V.91 Water bridges: A:H.88, A:H.88 Salt bridges: A:H.95, A:H.97 SO4.5: 7 residues within 4Å: Chain B: N.84, H.88, Q.89, E.90, V.91, H.95, H.97 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:N.84, B:E.90, B:V.91 Water bridges: B:H.88 Salt bridges: B:H.95, B:H.97

2 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.3: 6 residues within 4Å: Chain A: F.10, L.13, L.30, D.32, R.33, V.91 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:F.10, A:L.13, A:L.30, A:V.91 Hydrogen bonds: A:D.32, A:R.33 MPD.6: 6 residues within 4Å: Chain B: F.10, L.13, L.30, D.32, R.33, V.91 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:F.10, B:L.13, B:L.30, B:V.91 Hydrogen bonds: B:D.32, B:R.33

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Edwards, T.E. et al., Crystal structure of a zinc-containing HIT family protein from Encephalitozoon cuniculi. To be Published

Release Date

2011-03-30

Peptides

HIT family protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

HIT family protein