SMTL ID : 3r6s.1 (3 other biounits)

Crystal structure of GlxR transcription factor from Corynebacterium glutamicum with cAMP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.38 Å

Oligo State

homo-dimer

Ligands

2 x CMP: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE(Non-covalent)

CMP.1: 16 residues within 4Å: Chain A: F.61, L.80, L.92, M.95, F.101, G.102, E.103, L.104, S.105, R.112, T.113, S.114, R.153, T.157 Chain B: L.154, N.158 12 PLIP interactions: 10 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:G.102, A:E.103, A:E.103, A:L.104, A:S.105, A:S.105, A:T.113, A:R.153, A:T.157, B:N.158, B:N.158 Salt bridges: A:R.112 CMP.3: 16 residues within 4Å: Chain A: L.154, N.158 Chain B: F.61, L.80, L.92, M.95, F.101, G.102, E.103, L.104, S.105, R.112, T.113, S.114, R.153, T.157 13 PLIP interactions: 11 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:G.102, B:E.103, B:E.103, B:L.104, B:S.105, B:S.105, B:T.113, B:T.113, B:S.114, B:R.153, A:N.158, A:N.158 Salt bridges: B:R.112

1 x HEZ: HEXANE-1,6-DIOL(Non-covalent)

HEZ.2: 4 residues within 4Å: Chain A: V.52, R.53, F.54, Y.71 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:V.52, A:F.54 Hydrogen bonds: A:R.53, A:Y.71

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jungwirth, B. et al., Crystal structure of GlxR transcription factor from Corynebacterium glutamicum with cAMP. To be Published

Release Date

2012-03-28

Peptides

transcription regulator: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

transcription regulator

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