SMTL ID : 3r7p.1

The crystal structure of I-LtrI

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 9 residues within 4Å: Chain A: A.28, E.29, G.183, E.184 Chain C: A.1 Chain D: C.15 Chain E: G.1 Ligands: MG.2, MG.5 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:E.29, A:E.29, A:E.184

4 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)

MG.2: 5 residues within 4Å: Chain A: A.28, E.184 Chain C: A.1 Chain D: C.15 Ligands: MN.1 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:A.28, A:E.184, H2O.1, H2O.1 MG.3: 4 residues within 4Å: Chain A: G.183, K.274 Chain B: T.16 Chain E: G.1 No protein-ligand interaction detected (PLIP) MG.4: 1 residues within 4Å: Chain D: T.13 No protein-ligand interaction detected (PLIP) MG.5: 4 residues within 4Å: Chain C: A.1 Chain D: C.15 Chain E: G.1 Ligands: MN.1 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Takeuchi, R. et al., Tapping natural reservoirs of homing endonucleases for targeted gene modification. Proc.Natl.Acad.Sci.USA (2011)

Release Date

2011-07-20

Peptides

Ribosomal protein 3/homing endonuclease-like fusion protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ribosomal protein 3/homing endonuclease-like fusion protein

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