- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.37 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x MG: MAGNESIUM ION(Non-covalent)
- 4 x ACP: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER(Non-covalent)
ACP.2: 17 residues within 4Å:- Chain A: Y.8, N.12, F.13, I.14, N.19, V.46, G.47, T.48, G.49, K.50, T.51, H.52, K.178, V.201, R.202, E.205
- Ligands: MG.1
16 PLIP interactions:16 interactions with chain A- Hydrogen bonds: A:Y.8, A:Y.8, A:I.14, A:I.14, A:T.48, A:G.49, A:K.50, A:K.50, A:T.51, A:T.51, A:H.52, A:K.178, A:R.202, A:R.202
- Salt bridges: A:R.202
- pi-Stacking: A:H.52
ACP.4: 19 residues within 4Å:- Chain A: R.155
- Chain B: Y.8, N.12, F.13, I.14, N.19, V.46, G.47, T.48, G.49, K.50, T.51, H.52, D.106, K.178, V.201, R.202, E.205
- Ligands: MG.3
19 PLIP interactions:17 interactions with chain B, 2 interactions with chain A- Hydrogen bonds: B:Y.8, B:Y.8, B:I.14, B:I.14, B:N.19, B:T.48, B:G.49, B:K.50, B:K.50, B:K.50, B:T.51, B:H.52, B:D.106, B:K.178, B:R.202, B:R.202, A:R.155, A:R.155
- pi-Stacking: B:H.52
ACP.6: 18 residues within 4Å:- Chain B: R.155
- Chain C: Y.8, N.12, F.13, I.14, N.19, V.46, G.47, T.48, G.49, K.50, T.51, H.52, K.178, V.201, R.202, E.205
- Ligands: MG.5
17 PLIP interactions:15 interactions with chain C, 2 interactions with chain B- Hydrogen bonds: C:Y.8, C:I.14, C:I.14, C:T.48, C:G.49, C:K.50, C:K.50, C:K.50, C:T.51, C:H.52, C:K.178, C:R.202, C:R.202, B:R.155, B:R.155
- Salt bridges: C:R.202
- pi-Stacking: C:H.52
ACP.8: 19 residues within 4Å:- Chain C: R.155
- Chain D: Y.8, N.12, F.13, I.14, N.19, V.46, G.47, T.48, G.49, K.50, T.51, H.52, D.106, K.178, V.201, R.202, E.205
- Ligands: MG.7
17 PLIP interactions:15 interactions with chain D, 2 interactions with chain C- Hydrogen bonds: D:Y.8, D:I.14, D:I.14, D:T.48, D:G.49, D:K.50, D:K.50, D:K.50, D:T.51, D:H.52, D:K.178, D:R.202, D:R.202, C:R.155, C:R.155
- Salt bridges: D:R.202
- pi-Stacking: D:H.52
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Duderstadt, K.E. et al., DNA stretching by bacterial initiators promotes replication origin opening. Nature (2011)
- Release Date
- 2011-09-28
- Peptides
- Chromosomal replication initiator protein dnaA: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.37 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x MG: MAGNESIUM ION(Non-covalent)
- 4 x ACP: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Duderstadt, K.E. et al., DNA stretching by bacterial initiators promotes replication origin opening. Nature (2011)
- Release Date
- 2011-09-28
- Peptides
- Chromosomal replication initiator protein dnaA: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D