SMTL ID : 3ray.1

Crystal structure of Methyltransferase domain of human PR domain-containing protein 11

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.73 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.33, C.36, C.44, H.47 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.33, A:C.36, A:C.44, A:H.47

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 5 residues within 4Å: Chain A: F.158, Q.159, D.185, Y.186, R.189 Ligand excluded by PLIP

2 x NA: SODIUM ION(Non-functional Binders)

NA.3: 5 residues within 4Å: Chain A: G.73, C.88, V.89, E.91, I.93 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.91, A:E.91 NA.4: 3 residues within 4Å: Chain A: S.84, Y.143, V.145 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.84 Water bridges: A:S.84

5 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.5: 4 residues within 4Å: Chain A: F.40, C.44, G.48, P.49 No protein-ligand interaction detected (PLIP) UNX.6: 4 residues within 4Å: Chain A: W.118, L.119, Y.186 Ligands: UNX.9 No protein-ligand interaction detected (PLIP) UNX.7: 1 residues within 4Å: Chain A: H.47 No protein-ligand interaction detected (PLIP) UNX.8: 3 residues within 4Å: Chain A: S.117, I.146 Ligands: UNX.9 No protein-ligand interaction detected (PLIP) UNX.9: 6 residues within 4Å: Chain A: S.117, W.118, I.146, Y.182 Ligands: UNX.6, UNX.8 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dong, A. et al., Crystal structure of Methyltransferase domain of human PR domain-containing protein 11. To be Published

Release Date

2011-04-20

Peptides

PR domain-containing protein 11: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PR domain-containing protein 11