SMTL ID : 3rc5.1

Molecular mechanisms of viral and host-cell substrate recognition by HCV NS3/4A protease

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x ACE- GLN- GLU- ARG- GLU- VAL- PRO- CYS: Product MAVS(Non-covalent)

ACE-GLN-GLU-ARG-GLU-VAL-PRO-CYS.1: 18 residues within 4Å: Chain A: H.78, R.144, I.153, L.156, K.157, G.158, S.159, A.160, F.175, R.176, A.177, A.178, V.179, S.180, T.181, R.182, G.183, D.189 19 PLIP interactions: 19 interactions with chain A Hydrogen bonds: A:L.156, A:G.158, A:S.159, A:A.160, A:R.176, A:A.178, A:A.178, A:S.180, A:S.180, A:S.180, A:S.180, A:R.182, A:G.183 Water bridges: A:R.144, A:R.176 Salt bridges: A:H.78, A:R.144, A:R.144, A:R.176

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 2 residues within 4Å: Chain A: Y.27, Q.29 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.29 SO4.3: 6 residues within 4Å: Chain A: K.10, G.11, S.41, T.59, A.60, R.83 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.11, A:S.41, A:A.60 Salt bridges: A:R.83

1 x ZN: ZINC ION(Non-covalent)

ZN.4: 4 residues within 4Å: Chain A: C.118, C.120, C.166, H.170 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.118, A:C.120, A:C.166, A:H.170

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Romano, K.P. et al., Molecular mechanisms of viral and host cell substrate recognition by hepatitis C virus NS3/4A protease. J.Virol. (2011)

Release Date

2011-05-04

Peptides

NS3/4A protease: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

NS3/4A protease

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