SMTL ID : 3rfq.1

Crystal structure of Pterin-4-alpha-carbinolamine dehydratase MoaB2 from Mycobacterium marinum

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

homo-hexamer

Ligands

4 x NA: SODIUM ION(Non-functional Binders)

NA.1: 4 residues within 4Å: Chain A: S.129, D.165 Chain E: S.129, D.165 2 PLIP interactions: 2 interactions with chain E Hydrogen bonds: E:D.165 Water bridges: E:S.129 NA.3: 5 residues within 4Å: Chain C: S.129, D.165 Chain F: S.129, D.165 Ligands: NA.6 3 PLIP interactions: 1 interactions with chain C, 2 interactions with chain F Hydrogen bonds: C:D.165 Water bridges: F:D.165, F:D.165 NA.4: 4 residues within 4Å: Chain B: S.129, D.165 Chain D: S.129, D.165 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain D Water bridges: B:S.129, B:D.165 Hydrogen bonds: D:D.165 NA.6: 5 residues within 4Å: Chain C: S.129, D.165 Chain F: S.129, D.165 Ligands: NA.3 3 PLIP interactions: 1 interactions with chain C, 2 interactions with chain F Hydrogen bonds: C:S.129 Water bridges: F:D.165, F:D.165

2 x B3P: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-covalent)

B3P.2: 7 residues within 4Å: Chain A: N.83, E.113, I.114, L.115, D.116, S.148, G.149 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.113, A:L.115, A:D.116, A:G.149 B3P.5: 7 residues within 4Å: Chain D: N.83, E.113, I.114, L.115, D.116, S.148, G.149 3 PLIP interactions: 3 interactions with chain D Hydrogen bonds: D:L.115, D:D.116, D:G.149

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Baugh, L. et al., Increasing the structural coverage of tuberculosis drug targets. Tuberculosis (Edinb) (2015)

Release Date

2011-05-04

Peptides

Pterin-4-alpha-carbinolamine dehydratase MoaB2: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
A

E
B

F
C

Pterin-4-alpha-carbinolamine dehydratase MoaB2