SMTL ID : 3rgz.1

Structural insight into brassinosteroid perception by BRI1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.28 Å

Oligo State

monomer

Ligands

1 x NAG- NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-NAG.1: 9 residues within 4Å: Chain A: S.85, S.108, R.109, F.130, N.132, S.134, V.155, D.157, H.182 No protein-ligand interaction detected (PLIP)

3 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.2: 4 residues within 4Å: Chain A: S.231, N.253, S.255, Y.273 3 PLIP interactions: 3 interactions with chain A Water bridges: A:S.186, A:S.208, A:S.208 NAG-NAG.4: 1 residues within 4Å: Chain A: N.551 No protein-ligand interaction detected (PLIP) NAG-NAG.5: 2 residues within 4Å: Chain A: K.189, N.211 No protein-ligand interaction detected (PLIP)

1 x NAG- NAG- NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-NAG-NAG.3: 9 residues within 4Å: Chain A: N.499, N.523, E.586, H.588, S.608, T.609, R.610, N.611, P.612 No protein-ligand interaction detected (PLIP)

1 x BLD: Brassinolide(Non-covalent)

BLD.6: 12 residues within 4Å: Chain A: W.542, Y.575, Y.577, K.579, Y.620, H.623, T.624, S.625, P.626, M.635, N.683, I.684 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:W.542, A:W.542, A:Y.575, A:Y.577, A:N.683 Hydrogen bonds: A:S.625, A:S.625 Water bridges: A:Y.575, A:Y.575 Salt bridges: A:K.579

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.7: 3 residues within 4Å: Chain A: S.9, Y.11, R.12 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.9 Water bridges: A:R.12, A:R.12, A:R.12, A:R.12

3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.8: 1 residues within 4Å: Chain A: N.90 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.90 NAG.9: 3 residues within 4Å: Chain A: N.329, S.331, E.354 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.329 NAG.10: 2 residues within 4Å: Chain A: M.463, N.488 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

She, J. et al., Structural insight into brassinosteroid perception by BRI1. Nature (2011)

Release Date

2011-06-15

Peptides

Protein BRASSINOSTEROID INSENSITIVE 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein BRASSINOSTEROID INSENSITIVE 1

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