SMTL ID : 3rii.3 (2 other biounits)

Crystal structure of the catalytic domain of UCHL5, a proteasome-associated human deubiquitinating enzyme, reveals an unproductive form of the enzyme

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 7 residues within 4Å: Chain A: F.61, K.62, W.63, Q.64, E.67, Y.216, I.221 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.64, A:Q.64 Water bridges: A:W.63, A:W.63, A:Q.64 EDO.3: 7 residues within 4Å: Chain B: F.84, A.85, Q.96, A.97, S.100, L.183, G.185 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:A.85, B:Q.96, B:S.100 Water bridges: B:Q.87, B:A.97, B:G.185

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 2 residues within 4Å: Chain A: E.114, E.118 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.114, A:E.118, H2O.119, H2O.278

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Maiti, T.K. et al., Crystal structure of the catalytic domain of UCHL5, a proteasome-associated human deubiquitinating enzyme, reveals an unproductive form of the enzyme. Febs J. (2011)

Release Date

2011-11-09

Peptides

Ubiquitin carboxyl-terminal hydrolase isozyme L5: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Ubiquitin carboxyl-terminal hydrolase isozyme L5

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