SMTL ID : 3rju.1

Crystal Structure of Beta-lactamase/D-alanine Carboxypeptidase from Yersinia pestis complexed with citrate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x CIT: CITRIC ACID(Non-functional Binders)

CIT.1: 7 residues within 4Å: Chain A: S.62, R.120, Y.159, V.276, T.303, G.304, G.305 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:S.62, A:S.62, A:R.120, A:R.120, A:Y.159, A:T.303, A:G.305 Water bridges: A:K.65, A:G.273 Salt bridges: A:K.65, A:R.120, A:K.302, A:K.302

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 6 residues within 4Å: Chain A: Y.90, A.91, P.92, K.137, W.141, R.173 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Y.90, A:K.137, A:R.173 Water bridges: A:D.138, A:R.173 GOL.3: 4 residues within 4Å: Chain A: P.119, R.120, A.158, K.272 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.120, A:K.272 Water bridges: A:E.121, A:E.121 GOL.4: 5 residues within 4Å: Chain A: P.292, P.297, G.298, V.316, E.318 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.298, A:E.318 Water bridges: A:Y.289, A:Y.289

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, Y. et al., Crystal Structure of Beta-lactamase/D-alanine Carboxypeptidase from Yersinia pestis complexed with citrate. To be Published

Release Date

2011-04-27

Peptides

Beta-lactamase/D-alanine Carboxypeptidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-lactamase/D-alanine Carboxypeptidase

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