SMTL ID : 3rn2.1

Structural Basis of Cytosolic DNA Recognition by Innate Immune Receptors

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.55 Å

Oligo State

homo-dimer

Ligands

6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 8 residues within 4Å: Chain A: K.52, I.124, F.175, T.177, G.190, V.191, H.192, S.193 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.52, A:T.177, A:V.191, A:H.192 EDO.2: 4 residues within 4Å: Chain A: Q.11, L.15, Y.73, R.75 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.75, A:R.75 EDO.3: 5 residues within 4Å: Chain B: Q.11, L.15, F.49, Y.73, R.75 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:R.75 EDO.4: 7 residues within 4Å: Chain B: K.21, K.23, A.40, T.41, N.126, T.174, F.175 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:T.41 EDO.5: 4 residues within 4Å: Chain B: F.48, F.49, F.50, G.78 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:G.78 EDO.6: 2 residues within 4Å: Chain C: T.14 Chain D: A.6 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jin, T. et al., Structures of the HIN Domain:DNA Complexes Reveal Ligand Binding and Activation Mechanisms of the AIM2 Inflammasome and IFI16 Receptor. Immunity (2012)

Release Date

2012-04-25

Peptides

Interferon-inducible protein AIM2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Interferon-inducible protein AIM2

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