SMTL ID : 3rpc.1 (1 other biounit)

The crystal structure of a possible metal-dependent hydrolase from Veillonella parvula DSM 2008

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.49 Å

Oligo State

homo-dimer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: H.72, H.74, H.77, H.132, D.168 Ligands: ZN.2 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.72, A:H.74, A:H.132, A:D.168, H2O.325 ZN.2: 5 residues within 4Å: Chain A: D.76, H.77, D.168, H.226 Ligands: ZN.1 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.76, A:H.77, A:D.168, H2O.156, H2O.325 ZN.3: 6 residues within 4Å: Chain B: H.72, H.74, H.77, H.132, D.168 Ligands: ZN.4 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.72, B:H.74, B:H.132, B:D.168, H2O.636 ZN.4: 5 residues within 4Å: Chain B: D.76, H.77, D.168, H.226 Ligands: ZN.3 5 PLIP interactions: 3 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:D.76, B:H.77, B:H.226, H2O.416, H2O.636

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tan, K. et al., The crystal structure of a possible metal-dependent hydrolase from Veillonella parvula DSM 2008. To be Published

Release Date

2011-05-11

Peptides

possible metal-dependent hydrolase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

possible metal-dependent hydrolase

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