SMTL ID : 3rpf.1 (3 other biounits)

Protein-protein complex of subunit 1 and 2 of Molybdopterin-converting factor from Helicobacter pylori 26695

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

hetero-oligomer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: N.100, R.101 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.100, A:R.101 Water bridges: A:K.102, A:K.102 Salt bridges: A:R.101 SO4.4: 2 residues within 4Å: Chain C: N.100, R.101 5 PLIP interactions: 5 interactions with chain C Hydrogen bonds: C:N.100, C:R.101 Water bridges: C:K.102, C:K.102 Salt bridges: C:R.101

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 5 residues within 4Å: Chain A: L.57, W.61, N.118, L.141 Chain B: L.51 No protein-ligand interaction detected (PLIP) EDO.3: 5 residues within 4Å: Chain A: I.53, Y.54, E.55, A.56 Chain B: F.8 4 PLIP interactions: 1 interactions with chain B, 3 interactions with chain A Water bridges: B:D.49 Hydrogen bonds: A:I.53, A:E.55, A:A.56 EDO.5: 5 residues within 4Å: Chain C: L.57, W.61, N.118, L.141 Chain D: L.51 No protein-ligand interaction detected (PLIP) EDO.6: 5 residues within 4Å: Chain C: I.53, Y.54, E.55, A.56 Chain D: F.8 4 PLIP interactions: 3 interactions with chain C, 1 interactions with chain D Hydrogen bonds: C:I.53, C:E.55, C:A.56 Water bridges: D:D.49

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nocek, B. et al., Protein-protein complex of subunit 1 and 2 of Molybdopterin-converting factor from Helicobacter pylori 26695. TO BE PUBLISHED

Release Date

2011-06-29

Peptides

Molybdopterin synthase catalytic subunit: AC
Molybdopterin converting factor, subunit 1 (MoaD): BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

B
D

D
D

Molybdopterin synthase catalytic subunit

Molybdopterin converting factor, subunit 1 (MoaD)

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