SMTL ID : 3rpg.1 (2 other biounits)

Bmi1/Ring1b-UbcH5c complex structure

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.65 Å

Oligo State

hetero-1-1-1-mer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain B: C.18, C.21, C.39, C.42 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.18, B:C.21, B:C.39, B:C.42 ZN.2: 4 residues within 4Å: Chain B: C.34, H.36, C.53, C.56 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.34, B:H.36, B:C.53, B:C.56 ZN.3: 5 residues within 4Å: Chain C: T.69, C.72, H.74, C.92, C.95 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.72, C:H.74, C:C.92, C:C.95 ZN.4: 4 residues within 4Å: Chain C: C.56, C.59, C.77, C.80 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.56, C:C.59, C:C.77, C:C.80

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bentley, M.L. et al., Recognition of UbcH5c and the nucleosome by the Bmi1/Ring1b ubiquitin ligase complex. Embo J. (2011)

Release Date

2011-08-17

Peptides

Ubiquitin-conjugating enzyme E2 D3: A
Polycomb complex protein BMI-1: B
E3 ubiquitin-protein ligase RING2: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Ubiquitin-conjugating enzyme E2 D3

Polycomb complex protein BMI-1

E3 ubiquitin-protein ligase RING2

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